cortex.database.Database.get_mri_surf2surf_matrix¶
- Database.get_mri_surf2surf_matrix(subject, surface_type, hemi='both', fs_subj=None, target_subj='fsaverage', **kwargs)[source]¶
Get matrix generated by surf2surf to map one subject’s surface to another’s
- Parameters:
- subjectpycortex
pycortex subject ID
- surface_typestr
type of surface; one of [‘fiducial’, ‘inflated’, ‘white’, ‘pial’] … more?
- hemistr or list
one of: ‘both’, ‘lh’, ‘rh’
- fs_subjstr
string ID for freesurfer subject (if different from pycortex subject ID; None assumes they are the same)
- target_subjstr
string ID for freesurfer subject to which to map surface from subject (or fs_subj)
- Other Parameters:
- subjects_dirstr
Custom path to freesurfer subjects dir can be specified in the keyword args
- n_neighborsint
…
- random_statescalar
…
- n_test_imagesint
…
- coef_thresholdscalar or None
…
- renormalizebool
…